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java.lang.Objectorg.genepi.mean.parser.AbstractParser
org.genepi.mean.parser.BlastParserM9
public class BlastParserM9
Field Summary |
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Fields inherited from class org.genepi.mean.parser.AbstractParser |
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annot, from, hand, records, sens, to |
Constructor Summary | |
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BlastParserM9(FeatureHandler h,
java.util.Iterator rec)
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Method Summary | |
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void |
dispatchComplet(java.lang.String start,
java.lang.String end)
Alloc. d'une hypothese correspondante a un hit |
void |
parse()
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protected void |
parseHits(geno.core.util.tina.TinaRecord curRecParam,
java.util.Iterator rec)
Parser de fichier TINA resulat de l'execution d'un BLAST. |
Methods inherited from class org.genepi.mean.parser.AbstractParser |
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featureComplet |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public BlastParserM9(FeatureHandler h, java.util.Iterator rec)
Method Detail |
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public void parse() throws MeanException
parse
in class AbstractParser
MeanException
protected void parseHits(geno.core.util.tina.TinaRecord curRecParam, java.util.Iterator rec)
public void dispatchComplet(java.lang.String start, java.lang.String end)
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